Index

A

azimuthally_integrated_cbed_intensity_patterns() (in module prismatique.load)

B

blank_unprocessed_image_signal() (in module prismatique.hrtem.image)

blank_unprocessed_pattern_signal() (in module prismatique.cbed)

C

cbed_intensity_patterns() (in module prismatique.load) cbed_k_x_coords() (in module prismatique.load) cbed_k_y_coords() (in module prismatique.load) cbed_wavefunctions() (in module prismatique.load) check_atomic_coords_file_format() (in module prismatique.sample)

com_momenta() (in module prismatique.load) core_attrs (ModelParams property), [1], [2] (Params property), [1], [2], [3], [4], [5], [6], [7], [8], [9], [10], [11], [12], [13], [14], [15], [16] (PotentialSliceAndSMatrixSubsetIDs property) (PotentialSliceSubsetIDs property) (SMatrixSubsetIDs property)

D

data_size() (in module prismatique.hrtem.output) (in module prismatique.stem.output) de_pre_serialization_funcs (ModelParams property), [1], [2] (Params property), [1], [2], [3], [4], [5], [6], [7], [8], [9], [10], [11], [12], [13], [14], [15], [16] (PotentialSliceAndSMatrixSubsetIDs property) (PotentialSliceSubsetIDs property) (SMatrixSubsetIDs property) de_pre_serialize() (ModelParams class method), [1], [2] (Params class method), [1], [2], [3], [4], [5], [6], [7], [8], [9], [10], [11], [12], [13], [14], [15], [16] (PotentialSliceAndSMatrixSubsetIDs class method) (PotentialSliceSubsetIDs class method) (SMatrixSubsetIDs class method)

defocii() (in module prismatique.load) dump() (ModelParams method), [1], [2] (Params method), [1], [2], [3], [4], [5], [6], [7], [8], [9], [10], [11], [12], [13], [14], [15], [16] (PotentialSliceAndSMatrixSubsetIDs method) (PotentialSliceSubsetIDs method) (SMatrixSubsetIDs method) dumps() (ModelParams method), [1], [2] (Params method), [1], [2], [3], [4], [5], [6], [7], [8], [9], [10], [11], [12], [13], [14], [15], [16] (PotentialSliceAndSMatrixSubsetIDs method) (PotentialSliceSubsetIDs method) (SMatrixSubsetIDs method)

G

generate_potential_slices() (in module prismatique.sample) generate_probe_positions() (in module prismatique.scan) generate_S_matrices() (in module prismatique.sample) get_core_attrs() (ModelParams method), [1], [2] (Params method), [1], [2], [3], [4], [5], [6], [7], [8], [9], [10], [11], [12], [13], [14], [15], [16] (PotentialSliceAndSMatrixSubsetIDs method) (PotentialSliceSubsetIDs method) (SMatrixSubsetIDs method) get_de_pre_serialization_funcs() (ModelParams class method), [1], [2] (Params class method), [1], [2], [3], [4], [5], [6], [7], [8], [9], [10], [11], [12], [13], [14], [15], [16] (PotentialSliceAndSMatrixSubsetIDs class method) (PotentialSliceSubsetIDs class method) (SMatrixSubsetIDs class method)

get_pre_serialization_funcs() (ModelParams class method), [1], [2] (Params class method), [1], [2], [3], [4], [5], [6], [7], [8], [9], [10], [11], [12], [13], [14], [15], [16] (PotentialSliceAndSMatrixSubsetIDs class method) (PotentialSliceSubsetIDs class method) (SMatrixSubsetIDs class method) get_validation_and_conversion_funcs() (ModelParams class method), [1], [2] (Params class method), [1], [2], [3], [4], [5], [6], [7], [8], [9], [10], [11], [12], [13], [14], [15], [16] (PotentialSliceAndSMatrixSubsetIDs class method) (PotentialSliceSubsetIDs class method) (SMatrixSubsetIDs class method) grid_dims_in_units_of_probe_shifts() (in module prismatique.load) (in module prismatique.scan)

H

hrtem_beam_tilts() (in module prismatique.load) hrtem_image_wavefunctions() (in module prismatique.load)

hrtem_image_x_coords() (in module prismatique.load) hrtem_image_y_coords() (in module prismatique.load) hrtem_intensity_image() (in module prismatique.load)

I

integration_limits_of_2d_stem_output() (in module prismatique.load)

K

k_xy_coords_of_3d_stem_output() (in module prismatique.load)

L

layer_depths() (in module prismatique.stem.output) load() (ModelParams class method), [1], [2] (Params class method), [1], [2], [3], [4], [5], [6], [7], [8], [9], [10], [11], [12], [13], [14], [15], [16] (PotentialSliceAndSMatrixSubsetIDs class method) (PotentialSliceSubsetIDs class method) (SMatrixSubsetIDs class method)

loads() (ModelParams class method), [1], [2] (Params class method), [1], [2], [3], [4], [5], [6], [7], [8], [9], [10], [11], [12], [13], [14], [15], [16] (PotentialSliceAndSMatrixSubsetIDs class method) (PotentialSliceSubsetIDs class method) (SMatrixSubsetIDs class method)

M

ModelParams (class in prismatique.hrtem.system) (class in prismatique.sample) (class in prismatique.stem.system) module prismatique prismatique.aperture prismatique.cbed prismatique.discretization prismatique.hrtem prismatique.hrtem.image prismatique.hrtem.output prismatique.hrtem.sim prismatique.hrtem.system prismatique.load prismatique.sample prismatique.scan prismatique.scan.rectangular prismatique.stem prismatique.stem.output prismatique.stem.output.base prismatique.stem.output.multislice prismatique.stem.output.prism prismatique.stem.sim prismatique.stem.system prismatique.thermal prismatique.tilt prismatique.version prismatique.worker prismatique.worker.cpu prismatique.worker.gpu

N

num_frozen_phonon_config_subsets() (in module prismatique.sample) num_frozen_phonon_configs_in_subset() (in module prismatique.load) (in module prismatique.sample)

num_slices() (in module prismatique.load) (in module prismatique.sample)

O

output_layer_depths() (in module prismatique.load)

P

Params (class in prismatique.aperture) (class in prismatique.cbed) (class in prismatique.discretization) (class in prismatique.hrtem.image) (class in prismatique.hrtem.output) (class in prismatique.hrtem.sim) (class in prismatique.scan.rectangular) (class in prismatique.stem.output) (class in prismatique.stem.output.base) (class in prismatique.stem.output.multislice) (class in prismatique.stem.output.prism) (class in prismatique.stem.sim) (class in prismatique.thermal) (class in prismatique.tilt) (class in prismatique.worker) (class in prismatique.worker.cpu) (class in prismatique.worker.gpu) pattern_type() (in module prismatique.scan) potential_slice_set_data_size() (in module prismatique.sample) potential_slice_subset_data_size() (in module prismatique.sample) potential_slices() (in module prismatique.load) PotentialSliceAndSMatrixSubsetIDs (class in prismatique.sample) PotentialSliceSubsetIDs (class in prismatique.sample) pre_serialization_funcs (ModelParams property), [1], [2] (Params property), [1], [2], [3], [4], [5], [6], [7], [8], [9], [10], [11], [12], [13], [14], [15], [16] (PotentialSliceAndSMatrixSubsetIDs property) (PotentialSliceSubsetIDs property) (SMatrixSubsetIDs property) pre_serialize() (ModelParams method), [1], [2] (Params method), [1], [2], [3], [4], [5], [6], [7], [8], [9], [10], [11], [12], [13], [14], [15], [16] (PotentialSliceAndSMatrixSubsetIDs method) (PotentialSliceSubsetIDs method) (SMatrixSubsetIDs method) prismatique module prismatique.aperture module prismatique.cbed module prismatique.discretization module prismatique.hrtem module

prismatique.hrtem.image module prismatique.hrtem.output module prismatique.hrtem.sim module prismatique.hrtem.system module prismatique.load module prismatique.sample module prismatique.scan module prismatique.scan.rectangular module prismatique.stem module prismatique.stem.output module prismatique.stem.output.base module prismatique.stem.output.multislice module prismatique.stem.output.prism module prismatique.stem.sim module prismatique.stem.system module prismatique.thermal module prismatique.tilt module prismatique.version module prismatique.worker module prismatique.worker.cpu module prismatique.worker.gpu module probe_positions() (in module prismatique.load)

R

run() (in module prismatique.hrtem.sim) (in module prismatique.stem.sim)

S

S_matrix_k_xy_vectors() (in module prismatique.load) (in module prismatique.sample) S_matrix_set_data_size() (in module prismatique.sample) S_matrix_subset_data_size() (in module prismatique.sample) S_matrix_wavefunctions() (in module prismatique.load) scan_pattern_type() (in module prismatique.load) series() (in module prismatique.tilt)

SMatrixSubsetIDs (class in prismatique.sample) stem_intensity_images() (in module prismatique.load) step_size() (in module prismatique.tilt) supercell_dims() (in module prismatique.sample) supercell_lateral_pixel_size() (in module prismatique.sample) supercell_slice_thickness() (in module prismatique.sample) supercell_xy_dims_in_pixels() (in module prismatique.sample)

T

total_num_frozen_phonon_configs() (in module prismatique.sample)

U

unit_cell_dims() (in module prismatique.sample) update() (ModelParams method), [1], [2] (Params method), [1], [2], [3], [4], [5], [6], [7], [8], [9], [10], [11], [12], [13], [14], [15], [16] (PotentialSliceAndSMatrixSubsetIDs method) (PotentialSliceSubsetIDs method) (SMatrixSubsetIDs method)

V

validation_and_conversion_funcs (ModelParams property), [1], [2] (Params property), [1], [2], [3], [4], [5], [6], [7], [8], [9], [10], [11], [12], [13], [14], [15], [16] (PotentialSliceAndSMatrixSubsetIDs property) (PotentialSliceSubsetIDs property) (SMatrixSubsetIDs property)